[BioC] error coercing an exprSet to ExpressionSet

Seth Falcon sfalcon at fhcrc.org
Fri Nov 17 16:52:34 CET 2006


"Kimpel, Mark William" <mkimpel at iupui.edu> writes:

> Seth,
>
> You are correct. justRMA is not giving rownames to the se.exprs slot.
> Below is the nice output I got after following your advice.

Victory!  That justRMA doesn't give proper row names to se.exprs is a
bug.  We'll fix it.

> At some point in the future will justRMA and other background
> correction/normalization routines in Affy be outputting ExpressionSet
> rather than the deprecated exprSet?

Yes, the plan is that in the next release all functions that currently
produce exprSets will instead produce ExpressionSet objects.


+ seth



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