[BioC] GOstats and KEGG

Seth Falcon sfalcon at fhcrc.org
Thu Nov 16 19:15:48 CET 2006


Hi again,

Seth Falcon <sfalcon at fhcrc.org> writes:
> I've added code to the devel version of the Category and GOstats
> packages to support summary() and htmlReport() on the results of
> hyperGTest when applied to KEGG, PFAM, and GO categories.
>
> The updates will be availabe in the devel BioC repository tomorrow.
> I'm considering patching the release with this code since it makes the
> results much easier to display (I guess I can argue it is a bug of
> omission).

I have updated the release.  If you update Category and GOstats using
biocLite, you will now be able to call summary() and htmlReport() on
the hyperGTest results.

Best Wishes,

+ seth



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