[BioC] limma decideTests

Georg Otto georg.otto at tuebingen.mpg.de
Wed May 31 20:47:50 CEST 2006


Hi,

there seems to be a problem with decideTests (limma package):

results<-decideTests(fit2, adjust.method="BH")

gives a table with probe IDs as row names if the methods "separate" or
"global" are used. With methods "heirarchical" and "nestedF" however,
row names are missing. Is this a feature the purpose of which I do not
understand?

This is limma 2.6.2 and R 2.3.0

Best,

Georg



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