[BioC] reposTools 1.10.0 pointing to BioC1.7 not 1.8
Seth Falcon
sfalcon at fhcrc.org
Fri May 26 18:21:08 CEST 2006
Hi Steve,
Thanks for the report. The real bug here is that getBioC() pulled in
reposTools at all. We are now relying entirely on CRAN-style package
repositories. The reposTools stuff is deprecated --- we are not
hosting repositories that will work for it (except for old BioC
versions).
So to install packages, we recommend:
source("http://bioconductor.org/biocLite.R")
OR
source("http://bioconductor.org/getBioC.R")
And then
getBioC("somePackageHere")
OR
biocLite("somePackageHere")
Either one should pullin dependencies, etc. If you want to see a list
of the repositories that we host for the BioC packages try:
library("Biobase")
biocReposList()
Best,
+ seth
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