[BioC] GOstats and GenePix arrays
Francois Pepin
fpepin at cs.mcgill.ca
Thu May 11 20:38:47 CEST 2006
On Thu, 2006-05-11 at 10:57 -0700, rgentlem wrote:
> I am not sure why you think that you should do anything different for
> GenePix? The array used is completely irrelevant to this sort of
> hypergeometric testing and there should be no need to modify GOstats in
> any way.
I think it's the returned value of "go2Affy", containing (according to
the documentation) the "Affymetrix identifiers associated with that
node", which leads to confusion.
I know it took me a little while to make sure there were no hidden
dependencies.
Francois
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