[BioC] ad hoc tools for affy tiling arrays?
Dario Greco
dario.greco at helsinki.fi
Thu Jan 26 10:36:48 CET 2006
hi all,
we are probably going to use affymetrix tiling arrays for human.
i have understood that in some ways it is possible to use gcrma for image
preprocessing and that the quantile normalization might be a reasonable
method.
but i was wondering if there is (or if there is going to be) any ad hoc tool
in bioconductor also for the later steps of the analysis and interpretations
of such experiments.
any suggestions are warmly appreciated.
thanks,
greetings
d
--
Dario Greco
Institute of Biotechnology - University of Helsinki
Building Cultivator II
P.O.Box 56 Viikinkaari 4
FIN-00014 Finland
Office: +358 9 191 58951
Fax: +358 9 191 58952
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Lab WebPage:
http://www.biocenter.helsinki.fi/bi/dna-microarray/
Personal WebPage:
http://www.biocenter.helsinki.fi/bi/dna-microarray/dario.htm
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