[BioC] problem with command line arguments

madhurima bhattacharjee madhurima_b at persistent.co.in
Thu Jan 5 07:03:49 CET 2006

Hello Everybody,

I am running a R script through a perl code from command line.
The perl script is like:

my $cmd= 'R CMD BATCH D:/try5.R';

I run the perl code from command line.
Now I want to pass some command line arguments to the R script.
Its like the argv concept of perl.

Do I pass the arguments through my $cmd in the perl script?
If yes, then how to access that in the R script?
Any help will really be appreciated.

Thanks and Regards,

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