[BioC] nimblegen ChIP to chip array
ping_zheng@mail.wsu.edu
ping_zheng at mail.wsu.edu
Tue Feb 21 22:55:21 CET 2006
I have never analyzed microarray data, I would like to use Biochonductor
to analyze data provided by nimblegen. Method used was ChIP to chip array
and data is provided in the following format
*_ratio.gff, *_pair.txt, *_report.tab
How can I use normalizeBetweenArrays or Loess function for the data
provided by nimblegen in the format specified above?
Can someone tell me what type of data is required for applying these
functions?
Does the data format vary from company to company like nimblegen and
affymetrix?
Thank you for your time and help
Ping Zheng
More information about the Bioconductor
mailing list