[BioC] how to evaluate an Affymetrix custom sequencing chip

[Dr_Gyorffy_Balazs]

We have constructed a custom Affymetrix resequencing genechip assay for five
genes. We are looking for polymorphisms and new mutations.

Is there a package or function in Bioconductor we could use for the evaluation?

Thank you for your help:
Balazs Gyorffy
 

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Balázs GYÖRFFY MD, PhD
Semmelweis University Budapest
Szentágothai János Knowledge Centre,
Bókay u. 53/54, Budapest,
H-1088 Hungary
Tel: +36 1 266 0926 /2725
Fax: +36 1 303 6077
Email: zsalab2 at yahoo.com


	

	
		
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