[BioC] aCGH install requied sma

Seth Falcon sfalcon at fhcrc.org
Wed Dec 20 20:06:35 CET 2006


"zhu zhidong" <zzdxxh at online.sh.cn> writes:

> Dear BioC and Peter;
>
> when I install aCGH package on R( ver 2.4.1), but I was told that I
> must preinstall package sma, when I download the sma 9version 0.5.13
> 2003/08/15) package from
> http://www.stat.berkeley.edu/~terry/zarray/Software/smacode.html
> . then I was told that the version of sma is not suitable for R.
>
> can you give me some help

You didn't describe how you attempted to install aCGH.  If you try
with biocLite, I think you will get any needed dependencies (yes, sma
is a dependency)


source("http://bioconductor.org/biocLite.R")
biocLite("aCGH")

+ seth



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