[BioC] makecdfenv

Wolfgang Huber huber at ebi.ac.uk
Sat Dec 9 11:38:03 CET 2006


Dear Dr. Zhou,

this seems to be general problem with the computer system on which you are
trying to build the CDF package, rather than a specific makecdfenv
problem. I am not an expert for Windows, but please consult
http://www.murdoch-sutherland.com/Rtools/
for information on how to install packages from source format (i.e. what
you get from make.cdf.package) on your Windows system.

 Best wishes
 Wolfgang Huber

<quote who="Weiyin Zhou">
> Hi Dr. Huber,
>
>
>
> I have sent below e-mail to bioconductor several days ago.  But no
> response.  I really need your help.
>
>
>
>
>
> I was trying to create CDF package on window using following commands:
>
>
>
>> make.cdf.package("APOP.cdf", species="Homo_sapiens")
>
>
>
> It created a subdirectory apopcdf in my working directory.  Then at
> terminal, I typed:
>
>> R CMD INSTALL apopcdf
>
>
>
> Here is the error message I got:
>
>
>
> Microsoft (R) Program Maintenance Utility   Version 1.50
>
> Copyright (c) Microsoft Corp 1988-94. All rights reserved.
>
>
>
> NMAKE : fatal error U1065: invalid option '-' Stop.
>
> *** Installation of apopcdf failed ***
>
>
>
> Removing 'C:/PROGRA~1/R/R-24~1.0/library/apopcdf'
>
>
>
> I try to consult the help page for makecdfenv package, but all the links
> there are not working.
>
>
>
>
>
> Could you help me to find the problems?
>
>
>
> It will be very helpful to make the help link for this package works.
>
>
>
> Thanks in advance,
>
>
>
> Regards,
>
>
>
> Weiyin Zhou
>
> Statistics and Data Analyst
>
> ExonHit Therapeutics, Inc.
>
> 217 Perry Parkway, Building # 5
>
> Gaithersburg, MD 20877
>
>
>
> email: Weiyin.zhou at exonhit-usa.com
>
> phone: 240.404.0184
>
> fax: 240.683.7060



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