[BioC] error with GOHyperG

[Tony Long]

All:

I am getting an error message with GoHyperG (and a similar error with 
HyperGTable).

library("hgu95av2")
w1 <- as.list(hgu95avLOCUSID)
w2 <- unique(unlist(w1))
set.seed(123)
myLL1 <- sample(w2,100)
myLL2 <- c(myLL1, sample(w2,100))
xx <- GOHyperG(myLL1,"hgu95av2",what="BP",universe=myLL2)

Error:  value for 'GO:0031997' not found

>  sessionInfo()
Version 2.3.0 (2006-04-24)
i686-redhat-linux-gnu

attached base packages:
[1] "splines"   "tools"     "methods"   "stats"     "graphics"  "grDevices"
[7] "utils"     "datasets"  "base"

other attached packages:
drosophila2cdf    drosophila2        GOstats       Category       hgu95av2
        "1.4.7"       "1.12.0"        "1.6.0"        "1.4.1"       "1.12.0"
           KEGG       multtest     genefilter       survival         xtable
        "1.8.1"       "1.10.2"       "1.10.1"         "2.24"        "1.3-2"
           RBGL       annotate        Biobase             GO          graph
        "1.8.1"       "1.10.0"       "1.10.1"        "1.8.2"       "1.10.6"
          Ruuid
       "1.10.0"

Thanks!!

Tony
-- 
###########################

Tony Long

Ecology and Evolutionary Biology
Steinhaus Hall
University of California at Irvine
Irvine, CA
92697-2525

Tel:  (949) 824-2562   (office)
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email:  tdlong at uci.edu
http://hjmuller.bio.uci.edu/~labhome/