[BioC] qc

Per.Broberg at astrazeneca.com Per.Broberg at astrazeneca.com
Thu Aug 17 14:48:02 CEST 2006


Dear list

I tried to run the qc function from simpleaffy on a an object consisting of
70 U133A arrays

However, qc returned an error message indicating problems with allocating
enough memory. I had set --max-mem-size = 2000Mb.

What could I do about this?

 sessionInfo()
Version 2.3.1 (2006-06-01) 
i386-pc-mingw32 

attached base packages:
[1] "splines"   "tools"     "methods"   "stats"     "graphics"  "grDevices"
[7] "utils"     "datasets"  "base"     

other attached packages:
 simpleaffy  genefilter    survival     affyPLM       gcrma matchprobes 
    "2.6.0"    "1.10.1"      "2.26"     "1.8.0"     "2.4.1"     "1.4.0" 
   affydata        affy      affyio     Biobase     RWinEdt 
    "1.8.0"    "1.10.0"     "1.0.0"    "1.10.1"     "1.7-4" 


Cheers


Per Broberg



More information about the Bioconductor mailing list