[BioC] Non windows utility for CEL file Binary to Ascii format conversion

Henrik Bengtsson hb at stat.berkeley.edu
Sat Aug 12 05:58:40 CEST 2006


there are plans for this in the affxparser package, but it is not
among the top 10 priorities so it won't happen too soon.

However, since SScore is a R package it should not take much to update
the code so it makes use of affxparser instead of whatever it is using
now.  If you can't do it yourself, try to convince the maintainer of
SScore to do it.



On 8/11/06, Lakshmanan Iyer <laxvid at gmail.com> wrote:
> Hi
> The SScore package reads ascii  format affymatrix CEL files only and I have
> a few binary format CEL files.
> Affymatrix provides a tool that can be used to convert the formats but this
> is for windows only!
> I am wondering if there is any other utiltiy that allows one to convert the
> binary format Affymatrix CEL files to Ascii format.
> -Thanks
> -Lax
> Tufts University School of Medicine
> Tufts-New England College of Medicine
> Boston
> MA
>         [[alternative HTML version deleted]]
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