[BioC] Problem installing hexbin?

Seth Falcon sfalcon at fhcrc.org
Fri Apr 28 15:34:41 CEST 2006


Sander Oom <slist at oomvanlieshout.net> writes:
> Hi Seth,
>
> Thanks for your help! A little progress was achieved, but still no
> correct result:
>
>> srcHexbin <- "http://bioconductor.org/packages/1.8/bioc/src/contrib/"
>> install.packages("hexbin", contriburl=srcHexbin)

That is the URL for the 1.8 release (which was released _yesterday_)
and is only compatible with R 2.3.x.  You are using R 2.2.1.

In general, it is better to install Bioc packages like this:

source("http://bioconductor.org/biocLite.R")
biocLite("hexbin")

But the bug fix you need is not in the previous release.  So please
try upgrading to the latest R release (and then you _can_ use
biocLite).

+ seth



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