[BioC] invariant set normalisation

Seth Falcon sfalcon at fhcrc.org
Thu Apr 27 23:09:05 CEST 2006

Sally-Ann Walford <Sally at SCIENCE.uct.ac.za> writes:

> I am attempiting to use the cond.norm function in the smida package to
> normalise 30 cDNA dual channel arrays with approximately 15000 spots per
> array. I chose the quantile function using and invariant set =100. 
> Unfortunately I keep getting the following error message "Error: cannot
> allocate vector of size 207900 Kb".  does anyone know what this
> means?

It means you are running out of memory.  If you have another system to
try this on that has more RAM, you may find that your computation
succeeds without problem.

+ seth

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