[BioC] a problem with Metadat package: hgu133a2

Shi, Tao shidaxia at yahoo.com
Tue Oct 4 22:38:13 CEST 2005


Hi Chenwei,

I ran into this problem totally by random.  The annotation for this particular probeset is
diffrent from what I got from NetAffx:

> version
         _              
platform i386-pc-mingw32
arch     i386           
os       mingw32        
system   i386, mingw32  
status                  
major    2              
minor    1.1            
year     2005           
month    06             
day      20             
language R              
> get("221770_at", hgu133a2GENENAME)
[1] "solute carrier family 4, sodium bicarbonate transporter-like, member 10"

which should be for "206830_at".

> get("206830_at", hgu133a2GENENAME)
[1] "solute carrier family 4, sodium bicarbonate transporter-like, member 10"


The annotation I got from NetAffx is:

221770_at   ribulose-5-phosphate-3-epimerase


Could you please check what's going on?  Thanks,

...Tao



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