[BioC] alternate /tmp for Bioconductor install
Robert Citek
rwcitek at alum.calberkeley.org
Fri May 20 21:40:04 CEST 2005
On May 20, 2005, at 11:52 AM, Seth Falcon wrote:
> Well, there isn't a global Bioc version that you get query. The best
> thing to do is to compare the version numbers of a few packages
> against what is on the Bioconductor website.
>
> For example,
>
>> library(Biobase)
>> sessionInfo()
>>
> R version 2.1.0, 2005-04-29, x86_64-unknown-linux-gnu
>
> attached base packages:
> [1] "tools" "methods" "stats" "graphics" "grDevices"
> "utils"
> [7] "datasets" "base"
>
> other attached packages:
> Biobase
> "1.5.12"
>
> And then verify the version here:
> http://www.bioconductor.org/packages/bioc/stable/src/contrib/html/
I'm not that familiar with R, but I imagine that the above is
scriptable. That is, I should be able to traverse the package
dependency tree and query each package for its version. Is that
possible within R?
Regards,
- Robert
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