[BioC] alternate /tmp for Bioconductor install
Robert Citek
rwcitek at alum.calberkeley.org
Fri May 20 17:05:54 CEST 2005
On May 20, 2005, at 8:41 AM, Seth Falcon wrote:
> The new-and-improved (famous last words) getBioC script detects your
> version of R and downloads Bioc 1.5 for R 2.0.x and Bioc 1.6 for R
> 2.1.x. So it would be prudent to verify your version of R and the
> version of a few Bioconductor packages.
>
I used TMPDIR this time and it's working great. I pointed it to a
nice large partition.
As for the version, I did an 'apt-get install r-base libxml2-dev g77
atlas3-base-dev' which installed R v2.1.0. So, I assume I'm now
installing BioC 1.6. How can I tell? That is, how can I display
what version of BioC is installed?
BTW, for notes on what I'm doing:
http://www.cwelug.org/cgi-bin/wiki.cgi?BioConductor
Regards,
- Robert
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