[BioC] LIMMA- Warning message after eBayes function
Ankit Pal
pal_ankit2000 at yahoo.com
Fri May 20 05:56:38 CEST 2005
Dear all,
Sorry to repeat the question, but since I received no
reply for the same, I had to.
On running the eBayes function in LIMMA, I got the
following
error.
> fit_NODS7 <- eBayes(fit_NODS7)
Warning message:
Estimation of var.prior failed - set to default value
in: ebayes(fit = fit, proportion = proportion,
stdev.coef.lim = stdev.coef.lim)
What does it mean?
I know that the data is passed from the lmFit() step
to the eBayes() step without intervention from the
user. It worked for a couple of experiments and for
the third set, gave the above error.
Thank you,
-Ankit
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