[BioC] expresso

Alexander C Cambon accamb01 at louisville.edu
Fri May 13 20:53:38 CEST 2005


Medianpolish is in in log base 2. Many of the others are in regular numeric.

Alexander Cambon
Biostatistics and Bioinformatics
University of Louisville

>>> Jianping Jin <jjin at email.unc.edu> 5/11/2005 5:12:23 PM >>>
Dear BioC:

I used expresso to get expression values with the 
summary.method="medianpolish". I am wondering if the resulting values are 
in log base 2? Do the other methods, such as bgcorrect.method and 
normalize.method, also determine the output value in regular numeric or log 
form?

thanks!

Jianping Jin

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