[BioC] generalisation in the use of cclust (library cclust)

[emmanuelle.anthoine1 at etud.univ-ubs.fr]

hello, 
I would like to compare indexes in order to see which clustering algorithm (k- 
means, k-medoid, hierarchical clustering with euclidean and pearson distance) 
is more efficient. So I want to calculate the c-index and the db in all those 
cases(library cclust). 
To do that I use the cclust function. How can I run this function with pearson 
distance for k-means? How can I generalize cclust for hierarchical clustering 
and k-medoid? 
The class cclust object has a list of 13 components. Can anybody tell me how 
these components are calculated? 

thanks for everything. 
Emmanuelle Anthoine. 
 
 




--------------------------------------------------------------------------------
Université de Bretagne sud                               http://www.univ-ubs.fr/