[BioC] How to plot the graph object

[Robert Gentleman]

Hi,
  On Windows, you can install the windows version of graphviz (available  
at www.graphviz.org) and then serialze your plots, from R to GXL (using  
tools from the graph package - toGXL or dumpGXL), and then open the  
resultant files with graphviz. If so inclined you can (I have heard)  
suitably automate the process.

   Robert

On May 6, 2005, at 3:51 AM, Sean Davis wrote:

>
> On May 6, 2005, at 6:43 AM, Yilin Liu wrote:
>
>> It is said that the Rgraphviz package does not work under Windows
>> environment.
>> Then how to plot the graph in R with the use of graph package.
>>
>
> The Rgraphviz package depends on the graphviz libraries, which I think  
> is the issue and cannot be resolved in Windows.  The whole topic is  
> covered pretty extensively in the bioconductor archive thread starting  
> here:
>
> http://files.protsuggest.org/biocond/html/3390.html
>
> Sean
>
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>
>
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| Robert Gentleman              phone: (206) 667-7700                    
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| Head, Program in Computational Biology   fax:  (206) 667-1319   |
| Division of Public Health Sciences       office: M2-B865               
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| Fred Hutchinson Cancer Research Center                                 
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| email: rgentlem at fhcrc.org                                              
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