[BioC] LIMMA ignoring background

Guoneng Zhong guoneng.zhong at yale.edu
Mon May 2 22:39:07 CEST 2005


Hi,

I have two-channel image result files that don't have background information,
just median and mean intensity readings.  But read.maimages requires that I
provide Rb, Rf, Gb, Gf values, and I don't have the Rb and Gb values.  How do I
make the analysis ignore those columns?  I am doing a simple lmFit and topTable.

THanks!
G

-- 

Systems Programmer
Yale Center for Medical Informatics
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