[BioC] Ruuid requires specific MAKEFLAGS setting on Fedora Core 2
Robert Gentleman
rgentlem at fhcrc.org
Mon Jun 6 22:40:12 CEST 2005
Basically the simple answer is yes, and we should have something working
in the next few days; it looks for glib-config (which, while
deprecated in some systems is not in the ones I use and that makes
testing pkg-config a pain).
Best wishes
Robert
Uri David Akavia wrote:
> Jan T. Kim wrote:
>
>> Dear all,
>>
>> in the process of upgrading from R 2.0.1 to 2.1.0, I just installed
>> Bioconductor (again), and again, the installation of Ruuid (triggered
>> by getBioC("graph") required manual intervention because the glib headers
>> are not found by default:
>>
>> MAKEFLAGS='CFLAGS=-I/usr/include/glib-2.0\
>> -I/usr/lib/glib-2.0/include' R CMD INSTALL Ruuid
>>
>>
> Could getBioC be upgraded to use pkg-config? This is a very small
> script/program which gives locations of header files, and libraries, in
> a format suitable for compilation.
> IIRC, the syntax is something like pkg-config --include glib-2.0.
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
>
More information about the Bioconductor
mailing list