[BioC] Geo GDS parser availability
Saurin D. Jani
jani at musc.edu
Wed Jul 27 21:06:02 CEST 2005
Hi Sean,
Try to see on this page:
http://proteogenomics.musc.edu/quickSite/arrayQuest.php?page=home&act=manage&process=Methods_Library_List
Method number 14 does GEO analysis for TWO condition experiment and it also
parses GDS SOFT file. There is an R script.
Saurin
Quoting Sean Davis <sdavis2 at mail.nih.gov>:
> Not entirely BioConductor related, but I'll ask:
>
> Does anyone know of a GEO (gene expression omnibus) GDS parser (R,
> perl, or otherwise)?
>
> Thanks,
> Sean
>
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