[BioC] Error in qc.affy(unnormalised, ...) : I'm sorry, I, do not know about chip type: moe430acdf

Dan Frampton d.frampton at cs.ucl.ac.uk
Mon Jul 18 13:22:12 CEST 2005


Hi,

I am getting a similar error but with Drosophilia_2 chips:

 > qc.data <- qc(Data, ampli.eset)
  Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about 
chip type: drosophila2cdf


FYI, here's what cdfName gives me:

 > cdfName(Data)
[1] "Drosophila_2"


and here's my system info:

 > sessionInfo()
R version 2.1.0, 2005-05-09, i686-pc-linux-gnu

attached base packages:
[1] "tools"     "methods"   "stats"     "graphics"  "grDevices" "utils"
[7] "datasets"  "base"

other attached packages:
      limma  simpleaffy       gcrma matchprobes        affy  reposTools
    "1.9.3"    "2.0.13"     "1.1.3"    "1.0.12"   "1.5.8-1"     "1.5.2"
    Biobase
    "1.5.0"


Would this problem be related to Dick's?  Any help would be gratefully 
received!

Cheers,

Dan.

-- 
Dan Frampton
Bloomsbury Centre for Bioinformatics
Dept. Computer Science
University College London
Gower Street
London WC1E 6BT



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