[BioC] Retrieving microarray data from GEO?

[John Zhang]

Have a look at queryGEO of AnnBuilder.


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>Subject: [BioC] Retrieving microarray data from GEO?
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>Hi, Is there a utility in BioC to retrieve data sets in NCBI GEO? Will the 
>EFetch in Entrez do the job? Parsing something like this is not a big deal, 
>but I would like to have a cup of coffee instead. Thanks! -Simon
>http://www.ncbi.nlm.nih.gov/projects/geo/query/acc.cgi?view=data&acc=GSM79114
>
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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084