[BioC] how to get samoutput$mat.fdr and samoutput$delta from SAM object ? - help

[Sean Davis]

On 12/22/05 7:53 AM, "Saurin Jani" <saurin_jani at yahoo.com> wrote:

> Dear BioC,
> 
> I am using siggenes package. If anyone have used,
> please let me know, how can I get access of all
> samoutput$fdr and samoutput$delta values from
> samoutput object?
> 
> This might be very easy..but and even I have also
> opened Vignette but there is not information in
> Vignette as well.(sam.out$mat.fdr  gives NULL)

Saurin,

I haven't used SAM in a while, but have you tried:

str(sam.out)

That will give you the structure of the sam.out object and may give you a
hint about where to look.

Sean