[BioC] From KEGG pathways to Affy ProbeID

[Andrej Kastrin]

Sharon Anbu wrote:

>Hi All,
>
>I am trying to get Affy ProbeID for all the pathways (particularly for
>"rat") in KEGG.  I have found a way to do this using
>contents(KEGGPATHID2NAME) environment and by using grep to match a
>particular pathway. I have to do this step manually for all the pathways. Is
>there any other ways to extract affy probeids for corresponding pathways?
>
>Thank you very much in advance.
>
>Regards,
>Sharon
>
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>  
>
Try with apply()

Cheers, Andrej