[BioC] limma: positive correlation for dyeswap pairs

Naomi Altman naomi at stat.psu.edu
Wed Aug 3 22:51:14 CEST 2005

My plots were not attached to the previous message.

The plots shows one of the 2 biological replicates.  The dye-swap technical 
replicates are plotted against one another.  13% of the genes have 
correlation greater than 0.9, as computed by duplicateCorrelation.

Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Bioinformatics Consulting Center
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
University Park, PA 16802-2111
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