[BioC] BioC problem: cannot install moe430a

[stefano iacus]

On 29/lug/05, at 20:24, Arthur Liberzon wrote:


> Dear All!
>
> Do you know how to install moe430a package on a MacOSX 10.3.9 machine?
>
> I have R version 2.1.1 and the most recent stable release of
> Bioconductor ( I think it's 1.6).
>
>  From within R, I did the following:
>
>
>
>> source("http://www.bioconductor.org/getBioC.R")
>> getBioC(pkgs="moe430a")
>>
>>
>
>

HI, there is not such a package in binary form for R for OS X (yet).
Meanwhile, you can try to install the package from source by using

options(pkgType="source")

and then try again with

getBioC(pkgs="moe430a")

in the hope that there are enough tools on your system to build your  
package.

stefano




> And got this message:
>
> Running getBioC version 0.8  with R version  2.1.1
> Running biocinstall version 1.2  with R version  2.1.1
> Warning message:
> cannot open: HTTP status was '404 Not Found'
> Warning: unable to access index for repository
> http://www.bioconductor.org/packages/data/annotation/stable/bin/ 
> macosx/
> 2.1
> Warning message:
> cannot open: HTTP status was '404 Not Found'
> Warning: unable to access index for repository
> http://www.bioconductor.org/packages/data/experiment/stable/bin/ 
> macosx/
> 2.1
> Warning message:
> cannot open: HTTP status was '404 Not Found'
> Warning: unable to access index for repository
> http://www.bioconductor.org/packages/omegahat/stable/bin/macosx/2.1
> Warning message:
> cannot open: HTTP status was '404 Not Found'
> Warning: unable to access index for repository
> http://www.bioconductor.org/packages/lindsey/stable/bin/macosx/2.1
> dependency 'moe430a' is not available
>
> Thank you,
>
> Arthur Liberzon
>
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