[BioC] LimmaGUI Error

[jon butchar]

Sorry that this probably isn't much help, but do you get the same errors 
when doing these plots via command line instead of the limma GUI?

jon butchar




On Monday 01 August 2005 04:29 pm, Brooke-Powell, Elizabeth wrote:
> Hello there,
>
> I am writing for a second time to ask for some help with a LimmaGUI
> error I am having. I am trying to load some BlueFuse results files
> into LimmaGUI. I am able to load the data in (seen in R window as
> being read in). I am using the other file type function in limmaGUI.
> I have no errors when reading the information in, and I am also able
> to create an M box plot with no normalization for all slides. The
> problem is that when I go to plot an M box plot with any combination
> of normalization (either within norm and/or between slide
> normalization) I get the following errors:
>
> Error: subscript out of bounds
>
> Then
>
> Error in assign ("MAwithinArrays", MA, limmaGUIenvironment) : Object
> "MA" not found.
>
> I am using R in Windows XP, version R 2.1.1 and LimmaGUI version
> 1.3.9
>
> Please help....
>
> Liz
>
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