[BioC] package Ruuid

alberto goldoni alberto.goldoni at eurogene.org
Wed Sep 8 13:13:16 CEST 2004


On Tuesday 07 September 2004 02:55, you wrote:
i use debian and wtih apt-cache search glib-devel i obtain no results
there is no package called glib-devel
> alberto goldoni wrote:
> > Hi, i have R 1.9.0 under linux.
> > i have downladed Ruuid package and then when i'm trying to install Ruuid:
> > R CMD INSTALL /......../Ruuid_1.4.5.tar.gz
> > * Installing *source* package 'Ruuid' ...
> > creating cache ./config.cache
> > checking for glib-config... no
> > checking how to run the C preprocessor... cc -E
> > checking for /usr/include/unistd.h... yes
> > updating cache ./config.cache
> > creating ./config.status
> > creating src/Makevars
> > ** libs
> > gcc -I/usr/lib/R/include -I/usr/local/include/glib12 -DHAVE_UNISTD_H=1
> > -D__NO_MATH_INLINES -mieee-fp  -fPIC  -g -O2 -c Rinit.c -o Rinit.o
> > In file included from Ruuid.h:5,
> >                  from Rinit.c:1:
> > uuidP.h:24:18: glib.h: No such file or directory
> > In file included from Ruuid.h:5,
> >                  from Rinit.c:1:
> > uuidP.h:36: error: parse error before "guint32"
> > uuidP.h:36: warning: no semicolon at end of struct or union
> > uuidP.h:37: warning: data definition has no type or storage class
> > uuidP.h:38: error: parse error before "time_hi_and_version"
> > uuidP.h:38: warning: data definition has no type or storage class
> > uuidP.h:39: error: parse error before "clock_seq"
> > uuidP.h:39: warning: data definition has no type or storage class
> > uuidP.h:40: error: parse error before "node"
> > uuidP.h:40: warning: data definition has no type or storage class
> > uuidP.h:41: error: parse error before '}' token
> > make: *** [Rinit.o] Error 1
> > ERROR: compilation failed for package 'Ruuid'
> > ** Removing '/usr/local/lib/R/site-library/Ruuid'
> >
> >
> > what can i do?
>
> have the include files for glib installed (you do not tell what
> distribution you are using, so I can not help you further...
> if rpm-based, something like glib-devel would do it I think...)

-- 
Dott. Alberto Goldoni
Lab. Genetica Medica
S.Orsola-Malpighi Hospital
Via Massarenti n.9
40138 - BOLOGNA (BO) - ITALY
Mobile Phone: +39 3384145970
Fax: +39 051 636 4004
http://www.eurogene.org/
http://www.lagem.it



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