[BioC] problem with R2.0.0

[Ben Bolstad]

This message is typically given if your cel file seems corrupted (and
thus is shorter than expected). Try reading in smaller subsets of the
data until you figure out which file it is. You may be able to use the
verbose argument of ReadAffy() to find out which file it is choking on.

Thanks,

Ben


On Fri, 2004-10-29 at 08:34, Dianjing Guo wrote:
> Hi,
> 
> I found the following error message while trying to read in 30 soybean 
> cel files using R2.0.0:
> 
> Error in initialize(value, ...) : End of file reached unexpectedly. 
> Perhaps this file is truncated.
> 
> But i don't have problem read in small number of files (e.g 4 cel 
> files). Is there any limit for the file size to be read in each time?
> 
> Any comments regarding this would be highly appreciated.
> 
> Dianjing
> 
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-- 
Ben Bolstad <bolstad at stat.berkeley.edu>
http://www.stat.berkeley.edu/~bolstad