[BioC] HGU95a and HGU95av2 with gcrma

[Wolfgang Huber]

Hi Vincent
  An idea would be to make a package from the cdf environment produced
> by combineAffyBatch. But I don't see how to do this from
> make.cdf.package, which takes only Affymetrix CDF files as argument.
> How to make gcrma to use rawc$cdf?
> 
What is

   cdfname(rawc$dat)?

Other than creating a new CDF package, I think it should work if you 
create a variable with that name in your top level workspace that is the 
CDF environment, e.g.

   hgu95av12mixcdf = rawc$cdf

Let me know if that helps.
Bw
   Wolfgang
-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Phone: +44 1223 4944486
Http:  www.ebi.ac.uk/huber