[BioC] ChromoViz does not work
Wolfgang Huber
huber at ebi.ac.uk
Thu Nov 18 14:58:07 CET 2004
Hi Michael,
well, I guess that's the meaning of the "open development" clause in the
FAQs "What is Bioconductor?": Bioconductor is an open source and open
development software project ...
Apart from some minimal formal standards, there is no centralized
package reviewing or QC authority - it is done in a decentral manner by
the users via their feedback on this mailing list and "by voting with
their feet".
Note that there are a number of nice facilities for plotting data along
chromosomes in the geneplotter package.
Best wishes
Wolfgang
Auer Michael wrote:
> The package ChromoViz needs an object of CVF (Chromosomal Visualization
> Format) which can only be obtained by uploading a file onto the site
> http://www.snubi.org/software/ChromoViz/
> When doing this with the example data set on the site with the example
> provided below an error ocurrs
> Software error:
> Failed connect DB :
>
> For help, please send mail to the webmaster (hostmaster at snubi.org), giving
> this error message and the time and date of the error.
>
> I have emaild several times to this email but it does not exist. I have
> also tried other emails provided on the site but no one would answer. If
> the problem is not being solved I suggest taking the package from the
> bioconductor site because I spent a lot of time trying to solve the
> problem and I do not want others to make the same mistake!!!!!!
>
> NM_020299 4.3
> NM_003718 5.5
> NM_004874 11.1
> NM_020647 23.4
> NM_005271 0.0
>
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> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
--
Best wishes
Wolfgang
-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Http: www.dkfz.de/abt0840/whuber
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