[BioC] GOLL2GO
Ricardo Verdugo
raverdugo at ucdavis.edu
Wed Nov 10 01:54:31 CET 2004
Hello:
I am wondering if GOLL2GO is not available anymore in the GO package.
I just downloaded R 2.0.0 and installed Bioconductor.
Although in the online description of GO the environment GOLL2GO is listed, I can not find it in my installed version.
The output of GO() is
Quality control information for GO
Date built: Tue Sep 28 14:59:13 2004
Mappings found for non-probe based rda files:
GOALLLOCUSID found 7514
GOBPANCESTOR found 8808
GOBPCHILDREN found 4244
GOBPOFFSPRING found 4244
GOBPPARENTS found 8808
GOCCANCESTOR found 1420
GOCCCHILDREN found 470
GOCCOFFSPRING found 470
GOCCPARENTS found 1420
GOLOCUSID2ALLGO found 37866
GOLOCUSID2GO found 37866
GOLOCUSID found 6246
GOMFANCESTOR found 7370
GOMFCHILDREN found 1337
GOMFOFFSPRING found 1337
GOMFPARENTS found 7370
GOTERM found 17601
I have several scripts that depend on GO and I wonder if I will have to rewrite them.
Is LOCUSID same as LL (locus link) and why the change?
Thanks,
Ricardo.
~~~~~~~~~~~~~~~~~~~~~~
Ricardo A. Verdugo S., M.V.
Juan Medrano Laboratory
Animal Science Dept.
UC Davis, CA 95616
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