[BioC] affy package and segmentation error

[Laurent Gautier]

Hua Li wrote:
> 
> I am trying to use RMA for soybean chips. I have a problem with RMA causing
> 
> segmentation fault. I get
> Background correcting
> Normalizing
> Calculating Expression
> Segmentation Fault
> 
> It does not happen for the small chips like yeast or mouse. I wonder if 
> it is related with memory allocation when the C functions get called 
> since soybean chip has more than 60,000 genes.
> 
> Any suggestions are welcome.

In the immediate:
The use 'expresso' (with the RMA-advocated pre-processing methods) 
should be segfault-free...


HTH,

L.


> Thanks,
> 
> Hua Li
> 
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