[BioC] how deal with multiplicate affy probes?

[Michael Seewald]

On Fri, 26 Mar 2004, Sean Davis wrote:
> Finally, as noted above, blatting or blasting against the genome does not
> get you the same information.

Sorry, I didn't get your point: If *everything* is mapped to the genome, both
probes and transcript, what do you miss? Shouldn't the curated and curated
genome be the reference everything else is linked to (in 2004)? I don't think,
the transcript based mapping as done in GeneAnnot is the way to do it. It
complicates things without necessity.

Best wishes,
Michael