[BioC] Problems with Hu6800 and GCRMA...

[Liu, Yongxing]

Hi, 

I had a similar problem before. After I changed "hu6800" to "Hu6800" in each cell file, it worked fine for me. 

Yongxing
 
-----Original Message-----
From: Stiles, David (NIH/NIDDK) [mailto:DavidST at intra.niddk.nih.gov] 
Sent: Wednesday, March 10, 2004 2:36 PM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Problems with Hu6800 and GCRMA...

Dear Bioconductor Mailing List,

	I'm currently trying to run GCRMA on some Hu6800 Affymetrix GeneChip
data and keep receiving the following error after I type "eset
<-gcrma(Data)": "Please download and install the hu6800probe library from:
 http://www.bioconductor.org/data/metaData.html". I went to the website and
downloaded the probe library file from that webpage but I'm still receiving
the error message.  I have download other probe library files for other old
Affymetrix GeneChip designs and they have worked fine except for Hu35KD
which I can't download from the Metadata webpage because the link is bad.
Could you great guys and gals at Bioconductor fix the link for the Hu35KD
probe library file and find a solution for current problem I'm having
between GCRMA and Hu6800 probe library file?  Thank you for your time on
this matter.         

David Stiles
Technologist 
NIH/NIDDK Microarray Core Facility
Phone: (301) 496-0175
Fax: (301) 480-0855 

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