[BioC] Error in reading gal file with limma package

Joyce Gu jwgu at bcm.tmc.edu
Tue Mar 9 19:31:42 MET 2004


Hello,
I am using limma package to read my data into R, and I use the following 
command to read gal file to get layout, however, I got the following error 
messages,
> RG$genes<-readGAL(galfile="GID.gal",path="")
Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  
:
        line 4411 did not have 5 elements

and I did check line 4411, there ARE 5 elements. I do not know why this error 
occur. 
Any suggestion are greatly appreciated

********************************
Joyce Gu   M.S.
Scientific Programmer

Cancer Genomics Group
Baylor College of Medicine 
Phone: 832-824-4680
Fax: 832-825-4038



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