[BioC] vsn vignette (was: "matchprobes vignette?")
Wolfgang Huber
w.huber at dkfz-heidelberg.de
Thu Jun 17 19:06:30 CEST 2004
Hi Jeff,
in fact the .tar.gz file for the vsn package that is linked under
http://www.bioconductor.org/repository/release1.4/package/html/vsn.html
also does not contain a vignette. The .zip file, however, does.
Can you replace the .tar.gz file by one that built correctly?
(From the files that are left over in the inst/doc directory of that
tar-ball, it appears that Sweave terminated when it encountered a call
to affy::expresso, and I recall that there was a short period during the
run-up to the release when affy wasn't working)
Best wishes
Wolfgang
Jeff Gentry wrote:
>>It seems that the vignette of matchprobes is broken. I am using 1.9.1 alpha
>>(2004-05-25) and matchprobes 1.0.8. This is what I get:
>
>
> Hello ...
>
> It looks like the matchprobes vignette was still using a 'multiget' call,
> which was removed in favor of 'mget' in BioC-Devel. I thought I had
> rooted out all instances of multiget, but this one must have snuck through
> somehow. I have fixed this with verison 1.0.9.
>
> Sorry for the confusion,
> -J
>
--
-------------------------------------
Wolfgang Huber
Division of Molecular Genome Analysis
German Cancer Research Center
Heidelberg, Germany
Phone: +49 6221 424709
Fax: +49 6221 42524709
Http: www.dkfz.de/abt0840/whuber
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