[BioC] problem with expresso(...normalize.method="vsn")
Stefano Calza
stecalza at tiscali.it
Wed Jul 7 22:55:31 CEST 2004
Hi.
I want to use expresso to apply RMA with VSN normalization. I use the following code:
expresso(dati,normalize.method="vsn",bgcorrect.method="rma",pmcorrect.method="pmonly",summary.method="medianpolish")
Every is fine but when I get to
...
...
normalizing...vsn: [skipped]: Error: L-BFGS-B needs finite values of fn
What's wrong?
TIA,
Stefano
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