[BioC] LimmaGUI and limma

[Binita Dutta]

Dear All,

I want to analyse my data in limmaGUI. We have our own chip and use agilent 
scanner to scan the  slide. Later the scanned image is analysed by "Array 
vision" program. We export the data from Array vision as text file and then 
upload the text file in the database.

With this set up, I want to know how I can analyse the data with limmaGUI. 
(It is possible to export the files from our database as text file).

Best Regards,

Binita


One more question: can I import normalised M and A values from other 
program and then perform linear model fit using limma.
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Binita Dutta, PhD
MicroArray Facility(MAF)
UZ Gasthuisberg
Onderwijs en Navorsing
Herestraat 49
3000 Leuven
Belgium