[BioC] problem reading genepix files using both marray andlimma functions

[Bela Tiwari]

Thank you to both Gordon and Michael for all their time and comments!

Wow, the horrors abound in this set of files! And they also point out
the (many) assumptions I have been making about what has been going on
to produce these files. For instance, I had assumed that as these files
were all part of one experiment, they would all have one gal
file...especially as these people are already analysing this data (or so
I have been told) in GeneSpring. The rest of this saga should be
good.....   :-)

Its no wonder I didn't find that much out there in the mailing lists
about the problem I was seeing...these files could reasonably be called
a "fiasco".

Thank you for all the pointers. Off I go to right the world.


Bela

*************************
Dr. Bela Tiwari
Lead Bioinformatician

CEH Oxford
Mansfield Road
Oxford, OX1 3SR
01865 281975