May 2003 Archives by date
Starting: Thu May 1 10:28:07 MEST 2003
Ending: Sat May 31 06:00:02 MEST 2003
Messages: 236
- [BioC] Installing bioconductor under MacOsx
A.J. Rossini
- [BioC] ReadAffy problems
Dario Greco
- [BioC] ReadAffy problems
Laurent Gautier
- [BioC]
vignette feedback - HowTo: Automated Querying of PubMed Data
Lynn Young
- [BioC] Problem with VSN package AGAIN
Robert Gentleman
- [BioC] Installing bioconductor under MacOsx
Warnes, Gregory R
- [BioC] Installing bioconductor under MacOsx
Jeff Gentry
- [BioC] Installing bioconductor under MacOsx
Robert Gentleman
- [BioC] Installing bioconductor under MacOsx
Warnes, Gregory R
- [BioC] Installing bioconductor under MacOsx
Jeff Gentry
- [BioC] vignette feedback - HowTo: Automated Querying of PubMed
Data
John Zhang
- [BioC] RAE230A CDF
pcboutro at engmail.uwaterloo.ca
- [BioC] Installing bioconductor under MacOsx
Martino Barenco
- [BioC] RMA() versus expresso with RMA options
Benjamin Milo BOLSTAD
- [BioC] gene annotation with annotate() function
Vincent Carey 525-2265
- [BioC] RMA() versus expresso with RMA options
James MacDonald
- [BioC] rma error on 48 mgu74av2 slides
Dick Beyer
- [BioC] gene annotation with annotate() function
Henrik Kinnemann
- [BioC] RMA() versus expresso with RMA options
cmprobst
- [BioC] HTTP POST in R, Unigene
James Wettenhall
- [BioC] Installing bioconductor under MacOsx
Byron Ellis
- [BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
- [BioC] rma error on 48 mgu74av2 slides
James MacDonald
- [BioC]
drop the quote mark surround getBioC(libName = "all"), it is misl
eading.
Fan, Wenhong
- [BioC] expresso errors for MBEI
Ann Hess
- [BioC] error for library(affy): Error in if (e1[i] != e2[i])
return(TRUE) :...
Srikanth
- [BioC] ReadAffy(widget=TRUE) error in R 1.7.0 and affy 1.2.15
Dick Beyer
- [BioC] P values on Log or Non-Log Values
Park, Richard
- [BioC] P values on Log or Non-Log Values
James MacDonald
- [BioC] se.exprs/signficance analysis
Ann Hess
- [BioC] error for library(affy): Error in if (e1[i] != e2[i])
return(TRUE) :...
Jeff Gentry
- [BioC] se.exprs/signficance analysis
Rafael A. Irizarry
- [BioC] Boxplots and Histograms of PM data
Rafael A. Irizarry
- [BioC] Boxplots and Histograms of PM data
cmprobst
- [BioC] expresso errors for MBEI
Laurent Gautier
- [BioC] Boxplots and Histograms of PM data
Laurent Gautier
- [BioC] scaling the mad (fwd)
Rafael A. Irizarry
- [BioC] P values on Log or Non-Log Values
w.huber at dkfz-heidelberg.de
- [BioC] P values on Log or Non-Log Values
Gordon Smyth
- [BioC] memory error
Tapan Mehta
- [BioC] memory error
Tapan Mehta
- [BioC] memory error
A.J. Rossini
- [BioC] affy normalization
David Rickman
- [BioC] limma missing files
Dick Beyer
- [BioC] affy normalization
Laurent Gautier
- [BioC] (no subject)
Yongde Bao
- [BioC] limma missing files
Dick Beyer
- [BioC] memory error
alessandro.semeria at cramont.it
- [BioC] expresso errors for MBEI
Ann Hess
- [BioC] Ned cdf packae for ATH1
James MacDonald
- [BioC] expresso errors for MBEI
Ann Hess
- [BioC] Ned cdf packae for ATH1
Norman Warthmann
- [BioC] expresso errors for MBEI
Rafael A. Irizarry
- [BioC] data() function problem
ZRG (Zeren Gao)
- [BioC] Error while installing bioconductor on Unix machine
Tapan Mehta
- [BioC] limma missing files
Gordon Smyth
- [BioC] expresso errors for MBEI
Laurent Gautier
- [BioC] data() function problem
John Zhang
- [BioC] Error while installing bioconductor on Unix machine
Jeff Gentry
- [BioC] data() function problem
ZRG (Zeren Gao)
- [BioC] RMA identical expression values
Alessandra Luchini
- [BioC] Bioconductor on Unix: cannot load the library affy
Duhaime Johanne
- [BioC] Memory limit on Window with affy chips
Duhaime Johanne
- [BioC] Bioconductor on Unix: cannot load the library affy
Jeff Gentry
- [BioC] Memory limit on Window with affy chips
Laurent Gautier
- [BioC] data() function problem
John Zhang
- [BioC] Bioconductor on Unix: cannot load the library affy
Duhaime Johanne
- [BioC] Training session
Joshi, Nina (NIH/NCI)
- Install problems with BioC (was Re: [BioC] Bioconductor on Unix:
cannot load the library affy)
Jeff Gentry
- Install problems with BioC (was Re: [BioC] Bioconductor on Unix:
cannot load the library affy)
Jeff Gentry
- [BioC] Training session
Vincent Carey 525-2265
- [BioC] Bioconductor on Unix: cannot load the library affy
Duhaime Johanne
- [BioC] data() function problem
ZRG (Zeren Gao)
- [BioC] Macintosh package bundle (R 1.6.1) and (R 1.6.2)
Jeff Gentry
- [BioC] Bioconductor on Unix: cannot load the library affy
Ramon Diaz
- [BioC] Bioconductor on Unix: cannot load the library affy
Jeff Gentry
- [BioC] Macintosh package bundle (R 1.6.1) and (R 1.6.2)
Philippe Dessen
- Install problems with BioC (was Re: [BioC] Bioconductor on Unix:
cannot load the library affy)
Ramon Diaz
- [BioC] data() function problem
John Zhang
- Install problems with BioC (was Re: [BioC] Bioconductor on Unix:
cannot load the library affy)
Ramon Diaz
- Install problems with BioC (was Re: [BioC] Bioconductor on Unix:
cannot load the library affy)
Ramon Diaz
- [BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
- [BioC] warnings with affy package
Phguardiol at aol.com
- [BioC] warnings with affy package
Rafael A. Irizarry
- [BioC] (no subject)
Rafael A. Irizarry
- [BioC] (no subject)
Knud Josefsen
- [BioC] expresso errors for MBEI (fwd)
Ann Hess
- [BioC] heatmap colours
Warnes, Gregory R
- [BioC] heatmap colours
Jean Yee Hwa Yang
- [BioC] heatmap colours
Stephen Henderson
- [BioC] Sample names with ExprSet
Rafael A. Irizarry
- [BioC] Re: error in expresso, why..?
Knud Josefsen
- [BioC] Sample names with ExprSet
cmprobst
- [BioC] heatmap colours
Robert Gentleman
- [BioC] heatmap colours
Johannes Hüsing
- [BioC] heatmap colours
Byron Ellis
- [BioC] Release 1.2 on May 28th
Jeff Gentry
- [BioC] Error loading reposTools
Warnes, Gregory R
- [BioC] Error loading reposTools
Jeff Gentry
- [BioC] Error loading reposTools
Warnes, Gregory R
- [BioC] Error loading reposTools
Jeff Gentry
- [BioC] affy package
Clementine.BODY at eu.biomerieux.com
- [BioC] Last call for Spring Affy Software Developers' Conferences
DevNet
- [BioC] problem with "Tutorial for Bioconductor's marrayClasses
package"
Rob Dunne
- [BioC] Question about the MAS5 implementation in affy package.
Joachim.Theilhaber at aventis.com
- [BioC] heatmap colours
Johannes Hüsing
- [BioC] expresso errors for MBEI
Rafael A. Irizarry
- [BioC] expresso errors for MBEI
Rafael A. Irizarry
- [BioC] Warning message using ReadAffy()
Rafael A. Irizarry
- [BioC] Warning message using ReadAffy()
raffaele calogero
- [BioC] How to unzip the software demo for the short course:
Statistical
Methods and Software for the Analysis of DNA Microarray Experiments
SHEN, WEICHENG .
- [BioC] using less memory with 'affy'
Laurent Gautier
- [BioC] (no subject)
rinku saha
- [BioC] (no subject)
Laurent Gautier
- [BioC] clustering of genes
Laurent Gautier
- [BioC] How to unzip the software demo for the short course:
Statistical Methods and Software for the Analysis of DNA Microarray
Experiments
Sandrine Dudoit
- [BioC] Re: annotate / get
John Zhang
- [BioC] Basic question re: multiple testing
A.J. Rossini
- [BioC] LiWong
Rafael A. Irizarry
- [BioC] function within a function body?
SHEN, WEICHENG .
- [BioC] function within a function body?
Robert Gentleman
- [BioC] Update Packages from Bioconductor Error
pcboutro at engmail.uwaterloo.ca
- [BioC] bad region on slides
Rob Dunne
- [BioC] Re: annotate / get
Knud Josefsen
- [BioC] Question about MAS5 implementation in Affy package
Dapeng.Xu at aventis.com
- [BioC] clustering of genes
Gordon Smyth
- [BioC] clustering of genes
w.huber at dkfz-heidelberg.de
- [BioC] Question about MAS5 implementation in Affy package
Rafael A. Irizarry
- [BioC] Basic question re: multiple testing
Claire Wilson
- [BioC] LiWong
Raghu burri
- [BioC] affy normalization
Matthew Hobbs
- [BioC] affy normalization
Matthew Hobbs
- [BioC] function within a function body?
w.huber at dkfz-heidelberg.de
- [BioC] Basic question re: multiple testing
Adaikalavan Ramasamy
- [BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
- [BioC] Call for Papers: 2003 Affymetrix GeneChip Microarray
Low-level An alysis Workshop (fwd)
Rafael A. Irizarry
- [BioC] affycomp
Rafael A. Irizarry
- [BioC] Error wile reading .CEL files
Tapan Mehta
- [BioC] Error wile reading .CEL files
Tapan Mehta
- [BioC] Program No Responding
A.J. Rossini
- [BioC] program not responding
Lang Chen
- [BioC] Error wile reading .CEL files
Tapan Mehta
- [BioC] Program No Responding
Lang Chen
- [BioC] Error wile reading .CEL files
Jeff Gentry
- [BioC] Error wile reading .CEL files
w.huber at dkfz-heidelberg.de
- [BioC] Error wile reading .CEL files
w.huber at dkfz-heidelberg.de
- [BioC] Error message when trying to ReadAffy with widgets
function: help, please?
John Zhang
- [BioC] Error message when trying to ReadAffy with widgets
function: help, please?_Part 2
John Zhang
- [BioC] Expression values using RMA
Martino Barenco
- [BioC] p-values
Richard Hartley
- [BioC] Error message when trying to ReadAffy with widgets function:
help, please?
Fátima Núñez
- [BioC] p-values
Robert Gentleman
- [BioC] FW: p-values
Richard Hartley
- [BioC] Bioconductor
Claire Wilson
- [BioC] FW: p-values
Claire Wilson
- [BioC] Error message when trying to ReadAffy with widgets function:
help, please?_Part 2
Fátima Núñez
- [BioC] Error message when trying to ReadAffy with
widgetsfunction:help, please?_Part 2
Fátima Núñez
- [BioC] Experimental Design
Isaac Neuhaus
- [BioC] How to conditionally exit from a function?
SHEN, WEICHENG .
- [BioC] Bioconductor
Laurent Gautier
- [BioC] How to conditionally exit from a function?
Robert Gentleman
- [BioC] Expression values using RMA
Ben Bolstad
- [BioC] LocusLink query problem / bioC basic tutorial
Huang, Cheng-Cheng (NIH/NCI)
- [BioC] LocusLink query problem / bioC basic tutorial
Robert Gentleman
- [BioC] affycomp/GeneLogic Data
Ann Hess
- [BioC] reducing gene number in affybatch objects
Rafael A. Irizarry
- [BioC] affycomp/GeneLogic Data
Rafael A. Irizarry
- [BioC] Variance of M as a function of A in MA plots
Susan Holmes
- [BioC] Variance of M as a function of A in MA plots
Andrew Harrison
- [BioC] reducing gene number in affybatch objects
Hinnerk Boriss
- [BioC] p-values
alessandro.semeria at cramont.it
- [BioC] http://bioconductor.org/data/dataRepos/mgu74a_1.2.6.tar.gz
Lynn
- [BioC] Replicate Analysis
Park, Richard
- [BioC] http://bioconductor.org/data/dataRepos/mgu74a_1.2.6.tar.gz
John Zhang
- [BioC] reducing gene number in affybatch objects
Laurent Gautier
- [BioC] reducing gene number in affybatch objects
Rafael A. Irizarry
- [BioC] Variance of M as a function of A in MA plots
Rafael A. Irizarry
- [BioC] affycomp/GeneLogic Data
laurent buffat
- [BioC] reducing gene number in affybatch objects
Hinnerk Boriss
- [BioC] reducing gene number in affybatch objects
Rafael A. Irizarry
- [BioC] A Biologists Guide to using Bioconductor
Rafael A. Irizarry
- [BioC] reducing gene number in affybatch objects
Laurent Gautier
- [BioC] A Biologists Guide to using Bioconductor
Gordon Smyth
- [BioC] A Biologists Guide to using Bioconductor
Gordon Smyth
- [BioC] affycomp/GeneLogic Data
Rafael A. Irizarry
- [BioC] Reminder: Release 1.2 on May 28th
Jeff Gentry
- [BioC] getBioC and R configuration problem
Jeff Gentry
- [BioC] Bioconductor installation
Liang-Hao ding
- [BioC] getBioC and R configuration problem
Ron Ophir
- [BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
- [BioC] affycomp/GeneLogic Data
laurent buffat
- [BioC] getBioC and R configuration problem
alessandro.semeria at cramont.it
- [BioC] queries regarding bioconductor installation
Stephen Eglen
- [BioC] Two way ANOVA with bioconductor.
A.J. Rossini
- [BioC] Two way ANOVA with bioconductor.
A.J. Rossini
- [BioC] Two way ANOVA with bioconductor.
Susan Holmes
- [BioC] Two way ANOVA with bioconductor.
Alex F. Bokov
- [BioC] RMA expression with MAS P/A flags
Sue Kong
- [BioC] Two way ANOVA with bioconductor.
Alex F. Bokov
- [BioC] Error with ReadAffy
Isaac Neuhaus
- [BioC] Error with ReadAffy
Rafael A. Irizarry
- [BioC] Error with ReadAffy
Isaac Neuhaus
- [BioC] Error with ReadAffy
Laurent Gautier
- [BioC] Data formats
Vincent Carey 525-2265
- [BioC] Error with ReadAffy
Isaac Neuhaus
- [BioC] Busted moe430 win32 cdfenv links
James MacDonald
- [BioC] Busted moe430 win32 cdfenv links
Jeff Gentry
- [BioC] Data formats
Culhane, Aedin
- [BioC] 1.2 release of Windows binaries?
Tucker-Kellogg, Gregory
- [BioC] 1.2 release of Windows binaries?
Jeff Gentry
- [BioC] reducing gene number in affybatch objects
Hinnerk Boriss
- [BioC] Bioconductor 1.2 Released
Jeff Gentry
- [BioC] Problems installing v 1.2
A.J. Rossini
- [BioC] Problems installing v 1.2
Jeff Gentry
- [BioC] Biobase/BioBase capitalization user errors in Windows
Jeff Gentry
- [BioC] Problems installing v 1.2
Lapointe, David
- [BioC] Problems installing v 1.2
Jeff Gentry
- [BioC] Problems installing v 1.2
Christopher Wilkinson
- [BioC] Biobase/BioBase capitalization user errors in Windows
James Wettenhall
- [BioC] esApply puzzler
Stephen Henderson
- [BioC] bioconductor vs dchip
Rafael A. Irizarry
- [BioC] Two questions
Cappola, Thomas
- [BioC] loading affy cdf files
Nancy Petersen
- [BioC] Two questions
Rafael A. Irizarry
- [BioC] bioconductor vs dchip
Qi.Zhang at astrazeneca.com
- [BioC] using geneplotter with my own data
Jeff Gentry
- [BioC] Two questions
Rafael A. Irizarry
- [BioC] R
Lukas Jeker
- [BioC] Treatment vs. Control in cDNA Dye Swap Experiment
Jean Yee Hwa Yang
- [BioC] Treatment vs. Control in cDNA Dye Swap Experiment
White, Charles E WRAIR-Wash DC
- [BioC] using geneplotter with my own data
Matthew Hobbs
- [BioC] replicates and low expression levels
Rafael A. Irizarry
- [BioC] how to get expression data and output them
Jean Yee Hwa Yang
- [BioC] how to get expression data and output them
Lang Chen
- [BioC] replicates and low expression levels
Crispin Miller
- [BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
Last message date:
Sat May 31 06:00:02 MEST 2003
Archived on: Thu Aug 28 09:33:59 MEST 2003
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