[BioC] Installation problem
Terry Therneau
therneau at mayo.edu
Thu Jun 19 07:22:22 MEST 2003
I am having problems with the installation of bioconductor.
1. Download the getBioC script
2. Log in as the user "R":
cd ~R
R
> source ("getBioC.R")
> getBioC("affy")
It runs happily for a while, getting the versioning package, then falls
into a series of
WARNING: ignoring environment value of R_HOME
/usr/lib/R/bin/Rcmd: /usr/lib/R/bin/Rcmd: No such file or directory
messages.
It's not a surprise that it can't find /usr/lib/R -- that isn't where R is
installed on this machine.
How do I convince it to be a little less "smart", and not ignore R_HOME?
Thanks for any help,
Terry Therneau
(Please reply directly to me, since I don't subscribe to the R list).
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