[BioC] problems intalling bioconductor on windows NT

[martino barenco]

Thank you very much, it now works fine.

Martino

>From: Jeff Gentry <jgentry at jimmy.harvard.edu>
>To: martino barenco <m_barenco at hotmail.com>
>CC: bioconductor <bioconductor at stat.math.ethz.ch>
>Subject: Re: [BioC] problems intalling bioconductor on windows NT
>Date: Wed, 18 Jun 2003 13:10:52 -0400 (EDT)
>
>
>
>On Wed, 18 Jun 2003, martino barenco wrote:
> > [1] "Installation complete"
> > From URL:
> > http://www.bioconductor.org/repository/release1.2/package/Win32
> >         Biobase version 1.3.22
>
>Note that it installed Biobase .... getBioC, by default will keep on
>trucking if it can't get the dependencies.  To stop that behaviour, use
>'force=FALSE'
>
> > So, it seems that Biobase is not installed because genefilter can not be
> > found. Indeed, when I type:
>
>Well, Biobase was installed but genefilter was not, so ...
>
> > Error in checkPkgDeps(pkgname) : You can not load package Biobase as
> > it requires you to have package genefilter which is not currently
> > installed.
>
>Well, there is code in Biobase (not sure if we wantto keep it as such
>...) that will not allow Biobase to load unless all of its dependencies
>are installed.  Since genefilter was not installed, it won't load.
>
>Now.  As to why genefilter was not installed -> I unconvered a problem w/
>the Win32 genefilter, I believe that it is fixed but will keep an eye on
>it in the future.  It should be fixed now.
>
>-J
>
>