[BioC] problem with bioconductor install script

Claire Wilson ClaireWilson at picr.man.ac.uk
Fri Jun 13 17:50:36 MEST 2003


Hi Bela,

Were you running it from within R because if not that may solve your problems

claire

> -----Original Message-----
> From: Bela Tiwari [mailto:btiwari at ceh.ac.uk]
> Sent: 13 June 2003 16:43
> To: bioconductor at stat.math.ethz.ch
> Subject: [BioC] problem with bioconductor install script
> 
> 
> 
> Hello,
> 
> I have ran into problems trying to use the bioconductor install script
> as found on the web site: http://www.bioconductor.org/
> 
> These are the errors I saw when running under the bash shell and zsh.
> 
> 
> Running under bash shell:
> 
> sh-2.05a$ source getBioC.R
> sh: getBioC.R: line 55: syntax error near unexpected token `(l'
> sh: getBioC.R: line 55: `getBioC <- function (libName = "all", 
> relLevel = "release",'
> 
> 
> Running under zsh:
> 
>  source getBioC.R                                          [ 7:56]
> getBioC.R:55: number expected
> getBioC.R:62: no such file or directory: -
> getBioC.R:69: bad pattern: writeLines(paste(Running getBioC version
> ,getBioCVersion,....\n,\n                     If you 
> encounter problems,
> first make sure that\n,\n                     you are running 
> the latest
> version of getBioC()\n,\n                     which can be found at:
> www.bioconductor.org/getBioC.R,\n                     \n\n,\n        
>             Please direct any concerns or questions to,\n     
>           
>       bioconductor at stat.math.ethz.ch.\n,sep=))
> 
> 
> Just thought I'd let you know.
> 
> Bela
> 
> 
> 
> 
> *************************
> Dr. Bela Tiwari
> Lead Bioinformatician
> 
> CEH Oxford
> Mansfield Road
> Oxford, OX1 3SR
> 01865 281975
> 
> _______________________________________________
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> Bioconductor at stat.math.ethz.ch
> https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor
>
 
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